Quantum protein folding documentation

This repository explores protein folding using quantum computing approach. The implementations are inspired by and extend the methods described in Protein Folding Problem: A Quantum Approach.

This documentation provides an overview of the project’s Python modules, explaining their structure and functionality. It guides users through tools for building Hamiltonians, computing bead interactions, and simulating protein dynamics.

The sections below contain detailed references for each module, including their main classes, functions, and usage examples.